Contact
Email
scaffaa@grinnell.edu
Phone
641-269-9558
Address
1116 8th Ave
Noyce 1132
Grinnell, IA 50112-1500
United States
Alejandro Scaffa
Assistant Professor
I am an Assistant Professor of Biology at Grinnell College for the 2026–2027 academic year. In Fall 2026, I will teach Principles of Pharmacology (BIO-375) and the Biochemistry Laboratory (BCM-262L). I am an experimental and computational biologist interested in how cells respond differently to persistent stress and how these differences shape development, disease, and responses to treatment.
My research focuses on cellular senescence, a stress-induced state in which cells stop dividing but remain metabolically active and capable of influencing surrounding tissues. Although senescence is often treated as a single biological state, senescent cells can differ substantially in their metabolism, inflammatory signaling, secretory activity, survival, and susceptibility to intervention. I am interested in understanding this heterogeneity across tissues, diseases, and microenvironments, particularly in fibroblasts and other stress-responsive cell populations.
My current work uses computational and quantitative approaches to investigate these questions. Current projects include single-cell RNA sequencing analyses of senescent fibroblast states, quantitative analysis of cellular and nuclear morphology, and computational pathology workflows that transform annotated tissue images into structured single-cell datasets. A central goal of this work is to identify recurring patterns in how cells allocate energetic, redox, damage-repair, and secretory capacity under persistent stress. These patterns may help explain why apparently similar senescent cells have different biological functions and vulnerabilities.
I earned my Ph.D. in Molecular Pharmacology and Physiology from Brown University, where I studied how supplemental oxygen exposure causes cellular senescence, metabolic dysregulation, and lasting changes in postnatal lung development. I subsequently completed postdoctoral training at the pharmaceutical company Merck (Merck Research Laboratories), where I investigated cancer-associated fibroblasts, senescence, and the tumor microenvironment in pancreatic ductal adenocarcinoma. I later earned an M.S. in Computer Science from Northeastern University’s Roux Institute, adding formal training in algorithms, machine learning, and reproducible computational analysis.
In my teaching and research mentoring, I emphasize scientific reasoning, reproducibility, and the connection between molecular mechanisms and larger biological systems. I am particularly interested in helping students integrate experimental biology, computation, and quantitative analysis to address complex biomedical questions.
Education and Degrees
Education and degrees (please include years):
Northeastern University, Roux Institute
M.S. in Computer Science, 2026
Brown University
Ph.D. in Molecular Pharmacology and Physiology, 2020
M.A. in Molecular Pharmacology and Physiology, 2016
Grinnell College
B.A. with Honors in Biochemistry, 2014
Selected Publications
Yao, H., Wallace, J., Peterson, A., Scaffa, A., Rizal, S., Hegarty, K., Maeda, H., Chang, J., Oulhen, N., Kreiling, J., Huntington, K., De Paepe, M., Barbosa, G., & Dennery, P. A. (2023). Timing and cell specificity of senescence drives postnatal lung development and injury. Nature Communications, 14, 273. https://doi.org/10.1038/s41467-023-35985-4
Scaffa, A., Tollefson, G., Yao, H., Rizal, S., Wallace, J., Oulhen, N., Carr, J., Hegarty, K., Uzun, A., & Dennery, P. A. (2022). Identification of heme oxygenase-1 as a putative DNA-binding protein. Antioxidants, 11, 2135. https://doi.org/10.3390/antiox11112135
Scaffa, A., Yao, H., Oulhen, N., & Dennery, P. A. (2021). Single-cell transcriptomics reveals lasting changes in the lung cellular landscape into adulthood after neonatal hyperoxic exposure. Redox Biology, 48, 102091. https://doi.org/10.1016/j.redox.2021.102091
Scaffa, A. M., Peterson, A. L., Carr, J. F., Garcia, D., Yao, H., & Dennery, P. A. (2021). Hyperoxia causes senescence and increases glycolysis in cultured lung epithelial cells. Physiological Reports, 9(10), e14839. https://doi.org/10.14814/phy2.14839
Garcia, D., Carr, J. F., Chan, F., Peterson, A. L., Ellis, K. A., Scaffa, A., Ghio, A. J., Yao, H., & Dennery, P. A. (2021). Short exposure to hyperoxia causes cultured lung epithelial cell mitochondrial dysregulation and alveolar simplification in mice. Pediatric Research, 90(1), 58–65. https://doi.org/10.1038/s41390-020-01224-5
Carr, J. F., Garcia, D., Scaffa, A., Peterson, A. L., Ghio, A. J., & Dennery, P. A. (2020). Heme oxygenase-1 supports mitochondrial energy production and electron transport chain activity in cultured lung epithelial cells. International Journal of Molecular Sciences, 21(18), 6941. https://doi.org/10.3390/ijms21186941
